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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
226
total RNA-seq
165
ChIP-seq
40
ATAC-seq
18
small RNA-seq
17
pCHi-C
16
snATAC-seq
15
RRBS
12
WGBS
8
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
1
DNAme array
Assay category
40
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
0
January, 2021
Available data
19
bam
18
bed narrowPeak
11
bigWig
Organism
40
Homo sapiens
Biosample type
16
cell line
13
primary cell
6
tissue
5
in vitro differentiated cells
Organ
16
epithelium
16
pancreas
4
heart
2
blood vessel
2
vasculature
1
artery
1
brain
Project
40
AMP
Genome assembly (visualization)
23
hg19
19
GRCh38
Lab
35
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
16
inconsistent ontology term
assay_title!
CRISPRi RNA-seq
BIOSAMPLE
ASSAY
40 results
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ATAC-seq
cell line
EndoC_BH1
16
primary cell
monocyte
13
tissue
heart left ventricle
2
coronary artery
1
posterior cingulate cortex
1
right atrium auricular region
1
thoracic aorta
1
in vitro differentiated cells
embryonic stem cell
5
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