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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
whole genome sequencing assay
Assay category
23
DNA accessibility
Date released
20
May, 2022
1
August, 2017
1
February, 2021
1
October, 2019
Available data
23
bed narrowPeak
21
bigWig
3
bam
1
bed bed3
1
bigBed narrowPeak
1
fastq
Organism
23
Homo sapiens
Biosample type
21
tissue
1
cell line
1
primary cell
Organ
141
pancreas
103
epithelium
75
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
25
connective tissue
23
liver
12
bone element
12
skeleton
8
limb
6
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
23
AMP
Genome assembly (visualization)
23
hg19
3
GRCh38
Lab
20
Karen Mohlke, UNC
3
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
assay_title!
ChIP-seq
award.project!
T1D
files.file_type!
csv
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ATAC-seq
tissue
liver
20
right lobe of liver
1
cell line
HepG2
1
primary cell
Liver fetal (hepatocyte)
1
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