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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
547
ChIP-seq
188
total RNA-seq
22
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
22
DNA accessibility
Date released
20
May, 2022
1
August, 2017
1
February, 2021
October, 2019
Available data
22
bed narrowPeak
21
bigWig
2
bam
1
bed bed3
1
bigBed narrowPeak
1
fastq
Organism
22
Homo sapiens
Biosample type
21
tissue
1
cell line
Organ
149
pancreas
102
epithelium
75
kidney
47
heart
45
blood vessel
45
vasculature
44
artery
27
eye
22
liver
20
connective tissue
12
bone element
12
skeleton
6
limb
5
adipose tissue
3
brain
1
blood
1
bodily fluid
1
musculature of body
1
spleen
Project
22
AMP
Genome assembly (visualization)
22
hg19
2
GRCh38
Lab
20
Karen Mohlke, UNC
2
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_title!
GRO-seq
lab.title!
Struan F.A. Grant, CHOP
month_released!
October, 2019
BIOSAMPLE
ASSAY
22 results
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ATAC-seq
tissue
liver
20
right lobe of liver
1
cell line
HepG2
1
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