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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1276
total RNA-seq
1231
ChIP-seq
106
single cell RNA-seq
51
ATAC-seq
20
DNase-seq
18
small RNA-seq
17
WGBS
Hi-C
Assay category
51
DNA accessibility
Date released
14
September, 2018
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
3
September, 2020
2
October, 2019
1
February, 2021
Available data
208
bed narrowPeak
111
bam
64
xls
51
bigWig
42
fastq
24
bigBed narrowPeak
2
bed bed3
1
bed broadPeak
Organism
51
Homo sapiens
Biosample type
33
primary cell
18
tissue
Organ
37
pancreas
32
epithelium
4
heart
3
blood vessel
3
connective tissue
3
vasculature
2
adipose tissue
2
artery
2
brain
2
limb
1
liver
1
nerve
1
spleen
Project
41
AMP
10
HPAP
Genome assembly (visualization)
124
hg19
51
GRCh38
Lab
40
AMP-T2D consortium
10
Klaus Kaestner, Upenn
1
Stephen Parker, UMich
assay_title!
Hi-C
month_released!
June, 2019
BIOSAMPLE
ASSAY
51 results
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ATAC-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
osteoblast
1
tissue
body of pancreas
4
heart left ventricle
2
cerebellum (Hemisphere)
1
coronary artery
1
islet of Langerhans
1
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