Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
858
ChIP-seq
145
total RNA-seq
100
single cell RNA-seq
51
ATAC-seq
12
DNase-seq
11
WGBS
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
51
DNA accessibility
Date released
18
May, 2022
14
September, 2018
8
October, 2017
5
August, 2017
5
September, 2017
1
March, 2019
Available data
278
bed narrowPeak
175
bam
126
bigWig
64
xls
51
fastq
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
0
tagAlign bed3+
Organism
51
Homo sapiens
Biosample type
29
tissue
22
primary cell
Organ
46
pancreas
22
epithelium
2
adipose tissue
2
connective tissue
1
brain
1
liver
1
spleen
Project
51
AMP
Genome assembly (visualization)
49
hg19
32
GRCh38
Lab
31
AMP-T2D consortium
18
Kyle Gaulton, UCSD
Klaus Kaestner, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
assay_title!
MPRA
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
51 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
tissue
islet of Langerhans
20
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
right lobe of liver
1
+ See 2 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
See all biosamples
Download