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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
26
ATAC-seq
9
total RNA-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
Hi-C
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
26
DNA accessibility
Date released
16
May, 2021
9
February, 2021
1
November, 2019
Available data
10
bam
10
bed narrowPeak
bigWig
1
bed bed3
1
tsv
Organism
26
Homo sapiens
Biosample type
217
tissue
122
primary cell
30
in vitro differentiated cells
26
cell line
Organ
17
epithelium
17
pancreas
8
artery
8
blood vessel
8
heart
8
vasculature
1
liver
Project
26
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
26
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
1
inconsistent replicate
assay_title!
RRBS
files.file_type!
bigBed narrowPeak
bigWig
BIOSAMPLE
ASSAY
26 results
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ATAC-seq
cell line
EndoC_BH1
17
smooth muscle cell of the coronary artery
8
HepG2
1
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