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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1315
total RNA-seq
211
single cell RNA-seq
31
pCHi-C
24
ATAC-seq
18
small RNA-seq
6
WGBS
3
snDrop-seq
2
RNA microarray
Assay category
24
DNA accessibility
Date released
22
February, 2023
2
March, 2020
Available data
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
24
Homo sapiens
Biosample type
12
primary cell
6
tissue
5
in vitro differentiated cells
1
cell line
Organ
5
connective tissue
4
bone element
4
skeleton
2
pancreas
1
brain
1
epithelium
Project
24
AMP
Genome assembly (visualization)
12
hg19
Lab
24
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_title!
RRBS
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
24 results
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ATAC-seq
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
islet of Langerhans
1
+ See 1 more…
in vitro differentiated cells
chondrocyte
5
cell line
EndoC_BH1
1
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