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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
76
total RNA-seq
19
ATAC-seq
7
DNase-seq
single cell RNA-seq
3
pCHi-C
2
Capture-C
1
Hi-C
1
RRBS
Assay category
19
DNA accessibility
Date released
9
February, 2023
5
February, 2021
2
August, 2021
2
October, 2019
1
November, 2020
Available data
6
bed bed3
5
bigWig
4
bed bed3+
4
bed bedgraph
4
bed narrowPeak
2
bam
2
bigBed narrowPeak
Organism
19
Homo sapiens
Biosample type
17
in vitro differentiated cells
2
primary cell
Organ
152
pancreas
103
epithelium
75
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
25
connective tissue
23
liver
12
bone element
12
skeleton
8
limb
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
19
AMP
Genome assembly (visualization)
19
hg19
2
GRCh38
Lab
17
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
assay_title!
single cell RNA-seq
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
19 results
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ATAC-seq
in vitro differentiated cells
adipocyte
8
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
osteoblast
2
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