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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ATAC-seq
93
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
99
DNA accessibility
Date released
102
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
65
bed narrowPeak
12
tsv
10
bed bed3
bed bed3+
3
bed bedgraph
3
bigWig
3
txt
Organism
102
Homo sapiens
Biosample type
79
tissue
12
primary cell
8
in vitro differentiated cells
3
cell line
Organ
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
12
epithelium
11
pancreas
6
connective tissue
4
bone element
4
skeleton
1
adipose tissue
1
brain
Project
88
AMP
14
T1D
Genome assembly (visualization)
41
hg19
35
GRCh38
Lab
85
AMP-T2D consortium
14
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
7
inconsistent ontology term
files.file_type!
bed bed3+
csv
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ATAC-seq
CRISPR genome editing followed by DNA sequencing
tissue
coronary artery
35
retina
15
pigmented layer of retina
12
islet of Langerhans
11
acetabular part of hip bone
1
+ See 5 more…
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
in vitro differentiated cells
chondrocyte
5
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
EndoC_BH1
3
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