Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
362
ChIP-seq
5
total RNA-seq
1
Hi-C
1
WGBS
0
ATAC-seq
Assay category
362
DNA binding
Target of assay
293
transcription factor
82
recombinant protein
62
control
59
RNA binding protein
26
chromatin remodeller
2
histone
2
histone modification
2
narrow histone mark
1
other context
1
other post-translational modification
Date released
257
November, 2017
60
November, 2018
27
December, 2018
18
January, 2019
Available data
475
bam
420
fastq
414
bigWig
402
bed narrowPeak
353
bigBed narrowPeak
58
bed broadPeak
bigBed broadPeak
20
tagAlign
3
tar
1
bed bed3
1
tsv
Organism
362
Homo sapiens
Biosample type
362
cell line
249
tissue
120
in vitro differentiated cells
107
primary cell
3
stem cell
Organ
302
liver
60
blood
60
bodily fluid
Project
362
AMP
Genome assembly (visualization)
304
hg19
271
GRCh38
Lab
362
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
13
missing controlled_by
Audit category:
13
inconsistent control read length
8
inconsistent control run_type
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
362 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
302
GM12878
60
Download