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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
493
total RNA-seq
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
14
ATAC-seq
6
WGBS
3
snDrop-seq
2
ChIP-seq
2
pCHi-C
Assay category
14
DNA accessibility
2
DNA binding
Target of assay
1
control
1
transcription factor
Date released
400
November, 2017
301
August, 2017
223
October, 2019
199
May, 2021
150
May, 2020
117
August, 2021
94
December, 2017
80
April, 2019
77
May, 2022
74
October, 2018
70
May, 2019
70
November, 2018
65
February, 2023
46
September, 2018
40
May, 2024
39
November, 2019
34
December, 2018
31
June, 2019
25
January, 2019
24
February, 2018
23
October, 2017
16
February, 2021
11
May, 2023
11
September, 2017
7
August, 2020
7
March, 2020
4
July, 2019
4
March, 2019
3
January, 2018
3
September, 2020
1
November, 2020
Available data
12
bam
11
bed narrowPeak
4
bed bedgraph
2
bed bed3
2
bigWig
2
tagAlign
Organism
16
Homo sapiens
Biosample type
8
tissue
4
in vitro differentiated cells
3
cell line
1
primary cell
Organ
14
artery
14
blood vessel
14
heart
vasculature
8
bone element
8
skeleton
6
limb
5
connective tissue
1
liver
Project
16
AMP
Genome assembly (visualization)
15
hg19
11
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
1
inconsistent replicate
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
vasculature
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
+ See 3 more…
in vitro differentiated cells
adipocyte
4
cell line
iPSC derived cell line
2
HepG2
1
primary cell
osteoblast
1
See all biosamples
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