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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
total RNA-seq
90
ATAC-seq
75
ChIP-seq
15
single cell RNA-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
0
DNAme array
Assay category
90
DNA accessibility
Date released
100
May, 2020
77
May, 2022
76
August, 2021
68
February, 2023
35
May, 2021
26
November, 2019
22
October, 2019
14
February, 2021
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
July, 2019
1
November, 2020
Available data
90
bed narrowPeak
64
xls
24
bam
16
bigWig
14
bigBed narrowPeak
14
fastq
Organism
90
Homo sapiens
Biosample type
64
tissue
14
primary cell
12
in vitro differentiated cells
Organ
64
kidney
14
epithelium
14
pancreas
2
connective tissue
Project
90
AMP
Genome assembly (visualization)
88
GRCh38
26
hg19
Lab
64
Katalin Susztak, Upenn
24
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
organ_slims!
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BIOSAMPLE
ASSAY
90 results
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Clear Filters
ATAC-seq
tissue
kidney
64
primary cell
pancreatic beta cell
4
pancreatic ductal cell
4
pancreatic acinar cell
3
pancreatic alpha cell
3
in vitro differentiated cells
neural progenitor cell
10
adipocyte
1
osteoblast
1
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