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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
total RNA-seq
19
ATAC-seq
15
ChIP-seq
6
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
Hi-C
Assay category
19
DNA accessibility
1
3D chromatin structure
Date released
16
May, 2021
2
March, 2020
2
November, 2019
Available data
2
bigWig
1
bam
1
bed narrowPeak
1
bedpe bed3+
1
hic
1
tsv
Organism
20
Homo sapiens
Biosample type
20
cell line
Organ
20
epithelium
20
pancreas
Project
20
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
files.file_type!
bed bedgraph
month_released!
August, 2020
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
Hi-C
cell line
EndoC_BH1
19
1
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