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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
218
ChIP-seq
32
DNase-seq
21
total RNA-seq
16
ATAC-seq
4
small RNA-seq
3
Hi-C
3
pCHi-C
3
single cell RNA-seq
2
RRBS
1
FAIRE-seq
Assay category
16
DNA accessibility
3
3D chromatin structure
Date released
8
February, 2021
5
February, 2023
4
July, 2019
1
October, 2017
1
October, 2019
Available data
10
bam
8
bed narrowPeak
5
bed bed3
5
bigWig
3
bed bed3+
3
hdf5
1
fastq
Organism
19
Homo sapiens
Biosample type
16
tissue
3
primary cell
Organ
161
pancreas
111
epithelium
76
kidney
51
blood vessel
51
vasculature
50
heart
45
artery
28
eye
27
liver
26
connective tissue
12
bone element
12
limb
12
skeleton
7
brain
7
musculature of body
6
adipose tissue
2
vein
1
blood
1
bodily fluid
1
nerve
1
pituitary gland
1
skin of body
1
spleen
0
esophagus
Project
19
AMP
Genome assembly (visualization)
16
hg19
10
GRCh38
Lab
19
AMP-T2D consortium
BIOSAMPLE
ASSAY
19 results
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ATAC-seq
Hi-C
tissue
acetabular part of hip bone
1
brain
1
cerebellum (Hemisphere)
1
distal epiphysis
1
distal epiphysis of femur
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
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