Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
857
ChIP-seq
237
total RNA-seq
134
single cell RNA-seq
60
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
0
MPRA
Assay category
60
DNA accessibility
Date released
18
May, 2022
14
September, 2018
8
October, 2017
7
August, 2020
5
August, 2017
5
September, 2017
3
September, 2020
March, 2019
Available data
278
bed narrowPeak
174
bam
136
bigWig
64
xls
60
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
4
txt
1
bed broadPeak
Organism
60
Homo sapiens
Biosample type
32
primary cell
28
tissue
Organ
55
pancreas
32
epithelium
2
adipose tissue
2
connective tissue
1
brain
1
liver
1
spleen
Project
50
AMP
10
HPAP
Genome assembly (visualization)
49
hg19
42
GRCh38
Lab
31
AMP-T2D consortium
18
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
1
Stephen Parker, UMich
month_released!
March, 2019
BIOSAMPLE
ASSAY
60 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
tissue
islet of Langerhans
19
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
right lobe of liver
1
+ See 2 more…
See all biosamples
Download