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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
DNase-seq
52
single cell RNA-seq
51
ChIP-seq
43
ATAC-seq
41
WGBS
22
snATAC-seq
5
Hi-C
2
Capture-C
2
pCHi-C
2
total RNA-seq
0
MeRIP-seq
Assay category
52
Transcription
43
DNA accessibility
Date released
72
May, 2022
19
September, 2020
4
February, 2023
Available data
276
bam
273
bed narrowPeak
237
bigWig
225
tsv
190
fastq
91
zippedFastqFolder
64
xls
22
bigBed narrowPeak
16
txt
12
bed bed3
8
csv
7
bed bedgraph
4
bed bed3+
2
bed broadPeak
Organism
95
Homo sapiens
Biosample type
91
primary cell
4
in vitro differentiated cells
Organ
39
epithelium
39
pancreas
4
connective tissue
Project
91
HPAP
4
AMP
Genome assembly (visualization)
4
hg19
Lab
91
Klaus Kaestner, Upenn
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
September, 2017
BIOSAMPLE
ASSAY
95 results
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single cell RNA-seq
ATAC-seq
primary cell
Langerhans cell
52
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
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