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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
0
MeRIP-seq
Assay category
25
DNA accessibility
4
Transcription
Date released
10
February, 2023
5
February, 2021
3
October, 2019
2
April, 2018
2
August, 2021
2
July, 2018
1
August, 2017
1
January, 2018
1
November, 2019
1
November, 2020
1
October, 2017
Available data
13
bigWig
9
bam
8
bed narrowPeak
6
bed bed3
5
fastq
4
bed bed3+
4
bed bedgraph
4
bigBed narrowPeak
4
tsv
Organism
29
Homo sapiens
Biosample type
17
in vitro differentiated cells
6
primary cell
6
tissue
Organ
242
pancreas
179
epithelium
140
heart
139
kidney
52
blood vessel
52
vasculature
47
artery
29
connective tissue
28
eye
24
liver
12
bone element
12
skeleton
9
lung
8
limb
7
brain
6
adipose tissue
2
musculature of body
blood
1
bodily fluid
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
29
AMP
Genome assembly (visualization)
29
hg19
9
GRCh38
Lab
27
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
organ_slims!
blood
BIOSAMPLE
ASSAY
29 results
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ATAC-seq
single cell RNA-seq
in vitro differentiated cells
adipocyte
8
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
pancreatic stellate cell
4
osteoblast
2
tissue
adipose tissue
3
adipose tissue(adipose white tissue)
1
omental fat pad
1
subcutaneous adipose tissue
1
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