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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
825
ChIP-seq
211
total RNA-seq
133
single cell RNA-seq
47
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
47
DNA accessibility
17
DNA methylation
Date released
18
May, 2022
September, 2018
9
August, 2017
8
October, 2017
7
August, 2020
7
November, 2018
6
February, 2021
5
September, 2017
3
September, 2020
1
March, 2019
Available data
264
bed narrowPeak
179
bam
139
bigWig
80
zippedFastqFolder
64
fastq
64
xls
20
tsv
17
bed bedMethyl
17
bigBed bedMethyl
13
bigBed narrowPeak
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
64
Homo sapiens
Biosample type
39
tissue
24
primary cell
1
cell line
Organ
52
pancreas
24
epithelium
5
adipose tissue
5
connective tissue
3
liver
3
spleen
1
brain
Project
48
AMP
16
HPAP
Genome assembly (visualization)
37
GRCh38
35
hg19
Lab
28
AMP-T2D consortium
18
Kyle Gaulton, UCSD
16
Klaus Kaestner, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
month_released!
September, 2018
organ_slims!
large intestine
BIOSAMPLE
ASSAY
64 results
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ATAC-seq
WGBS
tissue
islet of Langerhans
20
body of pancreas
4
2
adipose tissue
3
spleen
1
2
pancreas
2
+ See 5 more…
primary cell
pancreatic alpha cell
10
6
pancreatic beta cell
6
pancreatic acinar cell
2
cell line
HepG2
1
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