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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
455
total RNA-seq
74
ChIP-seq
6
ATAC-seq
6
WGBS
2
DNase-seq
2
pCHi-C
2
small RNA-seq
1
RNA microarray
Assay category
6
DNA accessibility
Date released
2
March, 2020
1
August, 2017
1
February, 2023
1
January, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
4
bed narrowPeak
4
bigWig
3
bam
2
bigBed narrowPeak
2
fastq
2
tsv
Organism
8
Homo sapiens
Biosample type
in vitro differentiated cells
7
tissue
primary cell
1
stem cell
Organ
82
pancreas
77
kidney
50
heart
47
blood vessel
47
vasculature
45
artery
32
eye
31
epithelium
25
liver
12
bone element
12
skeleton
8
connective tissue
8
limb
7
adipose tissue
6
brain
2
intestine
2
musculature of body
2
spleen
2
thymus
1
adrenal gland
1
blood
1
bodily fluid
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
8
AMP
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
in vitro differentiated cells
primary cell
BIOSAMPLE
ASSAY
8 results
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ATAC-seq
pCHi-C
tissue
adipose tissue
3
1
adipose tissue(adipose white tissue)
1
omental fat pad
1
subcutaneous adipose tissue
1
stem cell
mesenchymal stem cell
1
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