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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
76
total RNA-seq
70
single cell RNA-seq
36
ATAC-seq
17
DNase-seq
1
FAIRE-seq
Assay category
70
Transcription
36
DNA accessibility
Date released
33
April, 2018
33
July, 2018
14
September, 2018
12
February, 2023
5
September, 2017
3
August, 2017
3
August, 2018
1
June, 2018
1
November, 2019
1
October, 2019
Available data
104
bigWig
98
fastq
94
bam
71
tsv
39
zippedFastqFolder
36
bed narrowPeak
22
bigBed narrowPeak
Organism
106
Homo sapiens
Biosample type
93
primary cell
12
tissue
1
cell line
Organ
145
pancreas
106
epithelium
64
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
27
eye
23
liver
12
connective tissue
8
bone element
8
limb
8
skeleton
5
brain
4
adipose tissue
1
nerve
1
spleen
Project
106
AMP
Genome assembly (visualization)
106
hg19
94
GRCh38
Lab
106
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
106 results
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single cell RNA-seq
ATAC-seq
primary cell
pancreatic beta cell
12
7
pancreatic alpha cell
12
6
pancreatic acinar cell
12
5
pancreatic ductal cell
10
4
pancreatic delta cell
11
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tissue
pigmented layer of retina
12
cell line
EndoC_BH1
1
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