Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
326
total RNA-seq
80
single cell RNA-seq
6
WGBS
2
ATAC-seq
2
small RNA-seq
1
pCHi-C
Assay category
80
Transcription
2
DNA accessibility
Date released
39
April, 2018
37
July, 2018
3
August, 2018
2
March, 2020
1
June, 2018
Available data
145
bam
131
fastq
121
bigWig
82
tsv
64
bed narrowPeak
39
zippedFastqFolder
22
bigBed narrowPeak
2
bed broadPeak
Organism
82
Homo sapiens
Biosample type
74
primary cell
7
tissue
1
cell line
Organ
92
heart
82
pancreas
71
epithelium
6
blood vessel
6
vasculature
5
kidney
4
connective tissue
3
brain
2
artery
Project
82
AMP
Genome assembly (visualization)
82
hg19
80
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
82 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 4 more…
tissue
islet of Langerhans
6
1
cell line
EndoC_BH1
1
See all biosamples
Download