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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
84
RNA microarray
22
ATAC-seq
8
ChIP-seq
6
single cell RNA-seq
3
snDrop-seq
2
pCHi-C
Assay category
22
DNA accessibility
6
Transcription
Date released
108
August, 2021
100
May, 2020
90
February, 2023
49
April, 2018
48
July, 2018
29
May, 2021
28
February, 2021
26
November, 2019
22
October, 2019
15
September, 2018
9
July, 2019
7
October, 2017
5
August, 2017
5
September, 2017
4
March, 2020
3
August, 2018
3
December, 2019
3
January, 2018
3
June, 2018
1
May, 2022
1
November, 2018
1
November, 2020
Available data
18
bam
18
bed narrowPeak
6
csv
5
tsv
5
txt
4
bed bedgraph
2
bed bed3
1
bigWig
Organism
28
Homo sapiens
Biosample type
14
tissue
9
cell line
4
in vitro differentiated cells
1
primary cell
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
limb
5
connective tissue
5
kidney
2
liver
Project
28
AMP
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
28
AMP-T2D consortium
12
Klaus Kaestner, Upenn
Audit category:
5
audit script error
1
inconsistent replicate
organ_slims!
large intestine
BIOSAMPLE
ASSAY
28 results
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ATAC-seq
single cell RNA-seq
tissue
kidney
5
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 5 more…
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
in vitro differentiated cells
adipocyte
4
primary cell
osteoblast
1
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