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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1315
total RNA-seq
211
single cell RNA-seq
78
ATAC-seq
31
pCHi-C
18
small RNA-seq
6
WGBS
3
snDrop-seq
2
RNA microarray
Assay category
78
DNA accessibility
18
Transcription
Date released
64
August, 2021
18
July, 2019
12
February, 2023
2
March, 2020
Available data
278
bed narrowPeak
193
bam
154
bigWig
64
xls
61
fastq
39
zippedFastqFolder
32
tsv
27
bigBed narrowPeak
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
96
Homo sapiens
Biosample type
81
tissue
14
primary cell
1
cell line
Organ
65
kidney
4
brain
4
pancreas
3
adipose tissue
3
connective tissue
3
liver
2
musculature of body
1
epithelium
1
heart
Project
96
AMP
Genome assembly (visualization)
82
GRCh38
20
hg19
Lab
64
Katalin Susztak, Upenn
32
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
96 results
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Clear Filters
ATAC-seq
small RNA-seq
tissue
kidney
64
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
+ See 11 more…
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
mesenchymal stem cell of adipose
1
+ See 1 more…
cell line
EndoC_BH1
1
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