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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
727
total RNA-seq
173
ChIP-seq
84
RNA microarray
56
ATAC-seq
27
snATAC-seq
19
pCHi-C
18
single cell RNA-seq
6
WGBS
3
snDrop-seq
1
DNAme array
Assay category
727
Transcription
56
DNA accessibility
Date released
570
February, 2021
290
May, 2020
216
May, 2021
196
February, 2023
150
August, 2021
120
July, 2018
103
May, 2022
94
August, 2017
52
October, 2019
50
July, 2019
46
November, 2019
40
September, 2018
25
February, 2020
19
March, 2020
19
September, 2020
15
February, 2018
12
May, 2023
8
October, 2017
7
August, 2020
5
December, 2019
5
January, 2019
5
November, 2020
5
September, 2017
4
March, 2019
3
January, 2018
2
October, 2018
Available data
749
bam
726
bigWig
721
tsv
31
bed narrowPeak
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
786
Homo sapiens
Biosample type
494
tissue
115
in vitro differentiated cells
107
cell line
70
primary cell
Organ
455
connective tissue
386
adipose tissue
83
pancreas
66
bone element
63
heart
60
artery
60
blood vessel
60
vasculature
48
epithelium
8
skeleton
6
limb
3
kidney
2
embryo
1
liver
Project
735
AMP
51
T1D
Genome assembly (visualization)
760
hg19
749
GRCh38
Lab
722
AMP-T2D consortium
64
Kyle Gaulton, UCSD
Audit category:
129
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
786 results
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Clear Filters
total RNA-seq
ATAC-seq
snDrop-seq
tissue
adipose tissue
381
bone tissue
58
islet of Langerhans
36
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 14 more…
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
18
embryonic stem cell
5
5
induced pluripotent stem cell
9
adipocyte
4
4
+ See 11 more…
cell line
smooth muscle cell of the coronary artery
52
8
EndoC_BH1
30
16
HepG2
1
primary cell
monocyte
52
13
CD8-positive, alpha-beta T cell
2
osteoblast
1
1
embryonic stem cell
1
See all biosamples
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