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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
896
total RNA-seq
550
ChIP-seq
177
DNase-seq
80
ATAC-seq
16
WGBS
16
small RNA-seq
6
single cell RNA-seq
Assay category
80
DNA accessibility
Date released
35
February, 2023
20
November, 2019
8
February, 2021
7
October, 2017
6
July, 2019
2
August, 2017
2
October, 2019
Available data
78
bed narrowPeak
45
bam
17
bigWig
9
fastq
2
bigBed narrowPeak
Organism
80
Homo sapiens
Biosample type
80
tissue
39
primary cell
17
in vitro differentiated cells
10
cell line
Organ
39
heart
38
blood vessel
38
vasculature
37
artery
23
pancreas
8
bone element
8
limb
8
skeleton
3
adipose tissue
3
connective tissue
2
brain
1
liver
1
nerve
1
spleen
Project
80
AMP
Genome assembly (visualization)
81
hg19
80
GRCh38
Lab
80
AMP-T2D consortium
75
Katalin Susztak, Upenn
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
80 results
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ATAC-seq
tissue
coronary artery
36
islet of Langerhans
19
body of pancreas
4
heart left ventricle
2
adipose tissue(adipose white tissue)
1
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