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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
102
ATAC-seq
94
total RNA-seq
56
ChIP-seq
6
snATAC-seq
5
Hi-C
5
STARR-seq
4
Capture-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
102
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
October, 2019
21
February, 2021
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
102
bed narrowPeak
64
xls
36
bam
2
bigWig
Organism
102
Homo sapiens
Biosample type
84
tissue
17
in vitro differentiated cells
1
cell line
Organ
64
kidney
20
pancreas
3
connective tissue
1
adipose tissue
1
epithelium
Project
102
AMP
Genome assembly (visualization)
100
GRCh38
38
hg19
Lab
64
Katalin Susztak, Upenn
36
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
7
inconsistent ontology term
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ATAC-seq
tissue
kidney
64
islet of Langerhans
19
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
neural progenitor cell
10
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
adipocyte
1
osteoblast
1
cell line
EndoC_BH1
1
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