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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
159
total RNA-seq
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
16
ATAC-seq
8
ChIP-seq
6
WGBS
3
snDrop-seq
2
pCHi-C
Assay category
16
DNA accessibility
Date released
102
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
25
November, 2019
19
October, 2019
16
February, 2021
14
September, 2018
11
May, 2023
7
August, 2020
7
October, 2017
6
July, 2019
5
September, 2017
4
August, 2017
4
March, 2019
4
March, 2020
3
September, 2020
2
January, 2018
1
November, 2020
Available data
12
bam
12
bed narrowPeak
4
bed bedgraph
2
bed bed3
1
bigWig
Organism
16
Homo sapiens
Biosample type
9
cell line
4
in vitro differentiated cells
2
tissue
1
primary cell
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
limb
5
connective tissue
1
liver
Project
16
AMP
Genome assembly (visualization)
16
hg19
12
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
1
inconsistent replicate
audit.WARNING.category!
inconsistent assembly
organ_slims!
adipose tissue
limb
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
in vitro differentiated cells
adipocyte
4
tissue
distal epiphysis
1
proximal epiphysis
1
primary cell
osteoblast
1
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