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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ATAC-seq
74
ChIP-seq
41
WGBS
34
single cell RNA-seq
29
total RNA-seq
22
snATAC-seq
17
pCHi-C
1
DNAme array
Assay category
80
DNA accessibility
Date released
103
February, 2023
66
August, 2021
59
May, 2022
55
May, 2020
21
May, 2021
16
October, 2019
11
May, 2023
7
August, 2020
4
February, 2021
4
March, 2020
3
January, 2018
3
March, 2019
3
September, 2020
1
October, 2017
Available data
51
bed narrowPeak
39
zippedFastqFolder
bam
25
bigWig
18
fastq
Organism
80
Homo sapiens
Biosample type
39
primary cell
20
tissue
16
cell line
5
in vitro differentiated cells
Organ
55
epithelium
55
pancreas
20
liver
Project
41
AMP
39
HPAP
Genome assembly (visualization)
25
hg19
Lab
39
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
16
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
16
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
files.file_type!
bam
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ATAC-seq
primary cell
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
liver
20
cell line
EndoC_BH1
16
in vitro differentiated cells
embryonic stem cell
5
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