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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1282
total RNA-seq
359
ChIP-seq
106
single cell RNA-seq
48
ATAC-seq
18
WGBS
18
small RNA-seq
1
pCHi-C
Assay category
48
DNA accessibility
Date released
45
May, 2020
1
July, 2019
1
March, 2019
1
October, 2017
Available data
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
48
Homo sapiens
Biosample type
45
primary cell
3
tissue
Organ
2
brain
1
pancreas
Project
48
AMP
Genome assembly (visualization)
45
hg19
2
GRCh38
Lab
47
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
4
inconsistent ontology term
award.project!
LungMap
files.file_type!
bed narrowPeak
bedpe bed3+
BIOSAMPLE
ASSAY
48 results
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ATAC-seq
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 20 more…
tissue
cerebellum (Hemisphere)
1
islet of Langerhans
1
posterior cingulate cortex
1
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