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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
ChIP-seq
76
total RNA-seq
54
ATAC-seq
36
single cell RNA-seq
19
DNase-seq
6
MeRIP-seq
6
RRBS
5
Hi-C
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
54
DNA accessibility
Date released
16
May, 2021
14
September, 2018
12
February, 2023
5
September, 2017
3
August, 2017
2
March, 2020
1
November, 2019
1
October, 2019
Available data
36
bed narrowPeak
24
bam
24
bigWig
22
bigBed narrowPeak
22
fastq
1
tsv
Organism
54
Homo sapiens
Biosample type
23
primary cell
19
cell line
12
tissue
Organ
92
pancreas
75
kidney
54
epithelium
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
25
connective tissue
23
liver
12
bone element
12
skeleton
8
limb
6
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
54
AMP
49
HPAP
Genome assembly (visualization)
38
hg19
24
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
month_released!
July, 2018
June, 2018
BIOSAMPLE
ASSAY
54 results
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ATAC-seq
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
Liver fetal (hepatocyte)
1
cell line
EndoC_BH1
19
tissue
pigmented layer of retina
12
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