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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
493
total RNA-seq
90
ATAC-seq
84
RNA microarray
52
single cell RNA-seq
49
snATAC-seq
47
WGBS
3
snDrop-seq
1
pCHi-C
Assay category
90
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
25
November, 2019
22
October, 2019
18
May, 2021
14
September, 2018
13
February, 2021
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
3
September, 2020
2
January, 2018
2
March, 2020
1
November, 2020
Available data
47
bed narrowPeak
39
zippedFastqFolder
27
bam
21
bigWig
18
fastq
4
bed bedgraph
1
bed bed3
Organism
90
Homo sapiens
Biosample type
46
tissue
40
primary cell
cell line
4
in vitro differentiated cells
Organ
57
pancreas
39
epithelium
20
liver
8
bone element
8
skeleton
6
limb
5
connective tissue
Project
51
AMP
39
HPAP
Genome assembly (visualization)
51
hg19
9
GRCh38
Lab
39
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
13
AMP-T2D consortium
biosample_type!
cell line
month_released!
December, 2019
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ATAC-seq
tissue
liver
20
islet of Langerhans
18
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 5 more…
primary cell
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
osteoblast
1
in vitro differentiated cells
adipocyte
4
See all biosamples
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