Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
404
ChIP-seq
113
total RNA-seq
28
ATAC-seq
6
pCHi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
MeRIP-seq
2
Capture-C
2
DNase-seq
2
Hi-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
28
DNA accessibility
Date released
16
May, 2021
8
February, 2021
2
March, 2020
1
January, 2018
1
November, 2019
Available data
10
bam
10
bed narrowPeak
3
bigWig
bed bed3
1
tsv
Organism
28
Homo sapiens
Biosample type
255
tissue
199
primary cell
37
in vitro differentiated cells
28
cell line
Organ
19
epithelium
19
pancreas
8
artery
8
blood vessel
8
heart
8
vasculature
1
blood
1
bodily fluid
Project
28
AMP
Genome assembly (visualization)
12
hg19
9
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
files.file_type!
bed bed3
hic
target.investigated_as!
control
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
cell line
EndoC_BH1
19
smooth muscle cell of the coronary artery
8
GM12878
1
Download