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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
476
ChIP-seq
35
total RNA-seq
20
ATAC-seq
6
MeRIP-seq
5
STARR-seq
5
pCHi-C
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
20
DNA accessibility
Date released
16
May, 2021
February, 2021
2
March, 2020
1
January, 2018
1
November, 2019
Available data
3
bigWig
1
bam
1
bed narrowPeak
1
tsv
Organism
20
Homo sapiens
Biosample type
251
tissue
199
primary cell
38
in vitro differentiated cells
20
cell line
Organ
19
epithelium
19
pancreas
1
blood
1
bodily fluid
Project
20
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
lab.title!
Maike Sander, UCSD
month_released!
February, 2021
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
cell line
EndoC_BH1
19
GM12878
1
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