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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 484ChIP-seq
  • 113total RNA-seq
  • 29ATAC-seq
  • 6MeRIP-seq
  • 6pCHi-C
  • 5STARR-seq
  • 4Hi-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 2Capture-C
  • 2DNase-seq
  • 2HiChIP
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1MPRA
  • 1WGBS
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 29DNA accessibility
Date released
  • 16May, 2021
  • 9February, 2021
  • 2March, 2020
  • 1January, 2018
  • 1November, 2019
Available data
  • 10bam
  • 10bed narrowPeak
  • 3bigWig
  • 1bed bed3
  • 1tsv
Organism
  • 29Homo sapiens
Biosample type
  • 260tissue
  • 200primary cell
  • 42in vitro differentiated cells
  • 29cell line
Organ
  • 19epithelium
  • 19pancreas
  • 8artery
  • 8blood vessel
  • 8heart
  • 8vasculature
  • 1blood
  • 1bodily fluid
  • 1liver
Project
  • 29AMP
Genome assembly (visualization)
  • 13hg19
  • 10GRCh38
Lab
  • 29AMP-T2D consortium
Audit category:
  • 19inconsistent ontology term
  • 1inconsistent replicate
BIOSAMPLE
ASSAY

29 results

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Clear Filters
ATAC-seq
cell line
EndoC_BH119
smooth muscle cell of the coronary artery8
GM128781
HepG21
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