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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
ChIP-seq
136
total RNA-seq
37
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
Assay category
37
DNA accessibility
Date released
12
August, 2021
7
February, 2023
5
May, 2021
5
November, 2019
4
February, 2021
4
October, 2019
Available data
21
bed narrowPeak
17
bam
12
bigWig
7
bed bedgraph
bed bed3
4
bed bed3+
3
txt
2
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
217
tissue
160
primary cell
37
in vitro differentiated cells
28
cell line
Organ
12
connective tissue
Project
37
AMP
Genome assembly (visualization)
37
hg19
17
GRCh38
Lab
27
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
10
inconsistent ontology term
files.file_type!
bed bed3
csv
month_released!
May, 2022
BIOSAMPLE
ASSAY
37 results
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ATAC-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
8
embryonic stem cell
6
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
immature adipocyte
2
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