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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 198ChIP-seq
  • 136total RNA-seq
  • 42ATAC-seq
  • 5pCHi-C
  • 4GRO-seq
  • 4Hi-C
  • 2Capture-C
  • 2single cell RNA-seq
  • 1DNase-seq
Assay category
  • 42DNA accessibility
Date released
  • 12August, 2021
  • 12February, 2023
  • 5May, 2021
  • 5November, 2019
  • 4February, 2021
  • 4October, 2019
Available data
  • 21bed narrowPeak
  • 17bam
  • 12bigWig
  • 7bed bedgraph
  • 5bed bed3
  • 4bed bed3+
  • 3txt
  • 2bigBed narrowPeak
Organism
  • 42Homo sapiens
Biosample type
  • 260tissue
  • 200primary cell
  • 42in vitro differentiated cells
  • 29cell line
Organ
  • 17connective tissue
Project
  • 42AMP
Genome assembly (visualization)
  • 42hg19
  • 17GRCh38
Lab
  • 32AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Struan F.A. Grant, CHOP
Audit category:
  • 10inconsistent ontology term
BIOSAMPLE
ASSAY

42 results

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ATAC-seq
in vitro differentiated cells
neural progenitor cell10
adipocyte8
embryonic stem cell6
Pancreatic progenitors (progenitor cell of endocrine pancreas)5
chondrocyte5
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