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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
262
ChIP-seq
155
total RNA-seq
151
ATAC-seq
102
single cell RNA-seq
29
DNase-seq
17
pCHi-C
10
RRBS
8
snATAC-seq
5
Hi-C
2
small RNA-seq
1
DNAme array
Assay category
151
DNA accessibility
Date released
100
May, 2020
14
September, 2018
13
May, 2021
12
February, 2023
5
September, 2017
3
August, 2017
2
October, 2019
1
February, 2021
1
November, 2020
Available data
84
bam
68
bigWig
39
bed narrowPeak
22
bigBed narrowPeak
22
fastq
12
tsv
1
bed bed3
Organism
151
Homo sapiens
Biosample type
260
tissue
151
primary cell
42
in vitro differentiated cells
29
cell line
Organ
23
epithelium
22
pancreas
2
connective tissue
1
liver
Project
151
AMP
Genome assembly (visualization)
84
hg19
39
GRCh38
Lab
151
AMP-T2D consortium
Klaus Kaestner, Upenn
Audit category:
12
inconsistent ontology term
lab.title!
Klaus Kaestner, Upenn
organ_slims!
vein
BIOSAMPLE
ASSAY
151 results
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ATAC-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
monocyte
15
macrophage
11
pancreatic beta cell
7
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