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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
981
total RNA-seq
907
ChIP-seq
234
ATAC-seq
180
single cell RNA-seq
178
DNase-seq
87
RNA microarray
28
snATAC-seq
25
pCHi-C
15
WGBS
11
Hi-C
5
RRBS
4
MeRIP-seq
3
snDrop-seq
2
FAIRE-seq
Assay category
234
DNA accessibility
Date released
79
February, 2023
64
August, 2021
38
May, 2022
November, 2019
16
October, 2019
11
May, 2023
8
February, 2021
8
October, 2017
July, 2019
4
March, 2019
2
August, 2017
2
January, 2018
2
March, 2020
Available data
183
bed narrowPeak
64
xls
38
bam
37
bigWig
29
fastq
5
bed bed3
3
bigBed narrowPeak
2
bed broadPeak
1
tsv
Organism
234
Homo sapiens
Biosample type
234
tissue
200
primary cell
37
in vitro differentiated cells
28
cell line
Organ
75
kidney
43
pancreas
36
artery
36
blood vessel
36
vasculature
35
heart
28
eye
21
liver
12
bone element
12
epithelium
12
skeleton
8
limb
5
adipose tissue
5
connective tissue
3
brain
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
223
AMP
11
T1D
Genome assembly (visualization)
132
GRCh38
97
hg19
Lab
105
AMP-T2D consortium
75
Katalin Susztak, Upenn
29
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
month_released!
July, 2019
November, 2019
BIOSAMPLE
ASSAY
234 results
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Clear Filters
ATAC-seq
tissue
kidney
75
islet of Langerhans
49
coronary artery
35
liver
20
retina
15
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