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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
84
ATAC-seq
74
total RNA-seq
58
ChIP-seq
6
snATAC-seq
5
STARR-seq
4
Capture-C
3
Hi-C
1
RNA microarray
1
whole genome sequencing assay
Assay category
84
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
82
bed narrowPeak
64
xls
17
bam
10
bigWig
8
fastq
1
bed broadPeak
Organism
84
Homo sapiens
Biosample type
72
tissue
12
in vitro differentiated cells
Organ
64
kidney
5
pancreas
3
connective tissue
1
adipose tissue
1
brain
1
spleen
Project
84
AMP
Genome assembly (visualization)
82
GRCh38
19
hg19
Lab
64
Katalin Susztak, Upenn
17
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
1
Stephen Parker, UMich
files.file_type!
bed bedMethyl
month_released!
November, 2018
BIOSAMPLE
ASSAY
84 results
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ATAC-seq
tissue
kidney
64
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
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in vitro differentiated cells
neural progenitor cell
10
adipocyte
1
osteoblast
1
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