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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
84
RNA microarray
30
ATAC-seq
27
snATAC-seq
23
ChIP-seq
18
single cell RNA-seq
6
WGBS
3
snDrop-seq
2
pCHi-C
Assay category
30
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
25
bam
24
bed narrowPeak
9
bigWig
8
fastq
4
bed bedgraph
2
bed bed3
1
bed broadPeak
Organism
30
Homo sapiens
Biosample type
16
tissue
9
cell line
4
in vitro differentiated cells
1
primary cell
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
connective tissue
6
limb
5
pancreas
1
adipose tissue
1
brain
1
liver
1
spleen
Project
30
AMP
Genome assembly (visualization)
29
hg19
26
GRCh38
Lab
29
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent replicate
files.file_type!
bed bedMethyl
month_released!
November, 2018
BIOSAMPLE
ASSAY
30 results
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ATAC-seq
tissue
body of pancreas
4
cerebellum (Hemisphere)
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 8 more…
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
in vitro differentiated cells
adipocyte
4
primary cell
osteoblast
1
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