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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
124
single cell RNA-seq
95
ATAC-seq
85
RNA microarray
59
total RNA-seq
33
snATAC-seq
16
ChIP-seq
6
WGBS
5
STARR-seq
4
Capture-C
3
Hi-C
3
snDrop-seq
2
pCHi-C
1
whole genome sequencing assay
Assay category
95
DNA accessibility
Date released
100
February, 2023
74
August, 2021
57
May, 2022
55
May, 2020
29
May, 2021
26
November, 2019
21
February, 2021
17
October, 2019
11
May, 2023
4
March, 2019
1
November, 2020
Available data
94
bed narrowPeak
64
xls
28
bam
4
bed bedgraph
bigWig
2
bed bed3
Organism
95
Homo sapiens
Biosample type
72
tissue
14
in vitro differentiated cells
9
cell line
Organ
64
kidney
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
limb
4
connective tissue
1
liver
Project
95
AMP
Genome assembly (visualization)
91
GRCh38
31
hg19
Lab
64
Katalin Susztak, Upenn
31
AMP-T2D consortium
Audit category:
1
inconsistent replicate
files.file_type!
bigWig
BIOSAMPLE
ASSAY
95 results
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Clear Filters
ATAC-seq
tissue
kidney
64
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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in vitro differentiated cells
neural progenitor cell
10
adipocyte
4
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
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