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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
50
total RNA-seq
32
ATAC-seq
19
DNase-seq
8
Hi-C
6
MeRIP-seq
6
RRBS
4
single cell RNA-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
32
DNA accessibility
Date released
May, 2022
16
May, 2021
12
February, 2023
2
March, 2020
1
November, 2019
1
October, 2019
Available data
36
bed narrowPeak
34
bigWig
fastq
24
bam
22
bigBed narrowPeak
1
tsv
Organism
32
Homo sapiens
Biosample type
19
cell line
12
tissue
1
primary cell
Organ
75
kidney
57
pancreas
47
heart
46
blood vessel
46
vasculature
45
artery
32
epithelium
28
eye
23
connective tissue
12
bone element
12
skeleton
8
limb
4
adipose tissue
3
brain
2
liver
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
Project
32
AMP
Genome assembly (visualization)
16
hg19
2
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
files.file_type!
fastq
month_released!
April, 2020
May, 2022
BIOSAMPLE
ASSAY
32 results
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ATAC-seq
cell line
EndoC_BH1
19
tissue
pigmented layer of retina
12
primary cell
Liver fetal (hepatocyte)
1
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