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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
848
ChIP-seq
231
total RNA-seq
134
single cell RNA-seq
35
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
35
DNA accessibility
Date released
May, 2022
14
September, 2018
October, 2017
7
August, 2020
5
August, 2017
5
September, 2017
3
September, 2020
1
March, 2019
Available data
234
bed narrowPeak
150
bam
108
bigWig
64
xls
35
fastq
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
1
bed broadPeak
Organism
35
Homo sapiens
Biosample type
32
primary cell
3
tissue
Organ
33
pancreas
32
epithelium
1
adipose tissue
1
connective tissue
1
liver
Project
25
AMP
10
HPAP
Genome assembly (visualization)
34
GRCh38
24
hg19
Lab
24
AMP-T2D consortium
10
Klaus Kaestner, Upenn
1
Mark McCarthy, Oxford
month_released!
May, 2022
October, 2017
BIOSAMPLE
ASSAY
35 results
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ATAC-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
tissue
islet of Langerhans
1
right lobe of liver
1
subcutaneous adipose tissue
1
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