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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 857ChIP-seq
  • 237total RNA-seq
  • 134single cell RNA-seq
  • 61ATAC-seq
  • 27snATAC-seq
  • 17WGBS
  • 12DNase-seq
  • 5GRO-seq
  • 4RRBS
  • 2FAIRE-seq
  • 1Hi-C
  • 1pCHi-C
Assay category
  • 61DNA accessibility
Date released
  • 18May, 2022
  • 14September, 2018
  • 8October, 2017
  • 7August, 2020
  • 5August, 2017
  • 5September, 2017
  • 3September, 2020
  • 1March, 2019
Available data
  • 278bed narrowPeak
  • 175bam
  • 136bigWig
  • 64xls
  • 61fastq
  • 39zippedFastqFolder
  • 27bigBed narrowPeak
  • 14tsv
  • 12bed bed3
  • 7bed bedgraph
  • 4bed bed3+
  • 3txt
  • 2bed broadPeak
Organism
  • 61Homo sapiens
Biosample type
  • 32primary cell
  • 29tissue
Organ
  • 56pancreas
  • 32epithelium
  • 2adipose tissue
  • 2connective tissue
  • 1brain
  • 1liver
  • 1spleen
Project
  • 51AMP
  • 10HPAP
Genome assembly (visualization)
  • 49hg19
  • 42GRCh38
Lab
  • 31AMP-T2D consortium
  • 18Kyle Gaulton, UCSD
  • 10Klaus Kaestner, Upenn
  • 1Mark McCarthy, Oxford
  • 1Stephen Parker, UMich
BIOSAMPLE
ASSAY

61 results

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Clear Filters
ATAC-seq
primary cell
pancreatic alpha cell13
pancreatic beta cell10
pancreatic acinar cell5
pancreatic ductal cell4
tissue
islet of Langerhans20
body of pancreas4
cerebellum (Hemisphere)1
omental fat pad1
right lobe of liver1
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