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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
208
ChIP-seq
54
ATAC-seq
34
total RNA-seq
16
DNase-seq
10
single cell RNA-seq
8
WGBS
5
Hi-C
5
pCHi-C
3
small RNA-seq
2
Capture-C
2
RRBS
1
RNA microarray
Assay category
54
DNA accessibility
Date released
45
February, 2023
February, 2021
October, 2019
2
August, 2021
2
July, 2019
1
August, 2017
1
January, 2018
1
November, 2019
1
November, 2020
1
October, 2017
Available data
44
bed narrowPeak
7
bigWig
6
bam
5
bed bed3
4
bed bed3+
2
fastq
1
bigBed narrowPeak
Organism
54
Homo sapiens
Biosample type
42
tissue
11
in vitro differentiated cells
1
primary cell
Organ
149
pancreas
102
epithelium
75
kidney
39
heart
37
blood vessel
37
vasculature
36
artery
27
eye
21
liver
17
connective tissue
5
adipose tissue
4
bone element
4
skeleton
3
brain
1
blood
1
bodily fluid
1
musculature of body
1
spleen
Project
54
AMP
Genome assembly (visualization)
41
GRCh38
19
hg19
Lab
52
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
month_released!
February, 2021
October, 2019
BIOSAMPLE
ASSAY
54 results
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ATAC-seq
tissue
coronary artery
36
adipose tissue
2
adipose tissue(adipose white tissue)
1
omental fat pad
1
subcutaneous adipose tissue
1
+ See 1 more…
in vitro differentiated cells
chondrocyte
5
adipocyte
2
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
osteoblast
1
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