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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
619
total RNA-seq
133
single cell RNA-seq
98
ATAC-seq
85
RNA microarray
51
ChIP-seq
43
snATAC-seq
6
WGBS
5
STARR-seq
4
Capture-C
3
Hi-C
3
snDrop-seq
2
pCHi-C
1
whole genome sequencing assay
Assay category
98
DNA accessibility
Date released
103
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
0
April, 2020
Available data
94
bed narrowPeak
64
xls
28
bam
4
bed bedgraph
3
bigWig
2
bed bed3
Organism
98
Homo sapiens
Biosample type
72
tissue
16
in vitro differentiated cells
9
cell line
1
primary cell
Organ
64
kidney
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
7
connective tissue
6
limb
1
liver
Project
98
AMP
Genome assembly (visualization)
92
GRCh38
34
hg19
Lab
64
Katalin Susztak, Upenn
32
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent replicate
month_released!
August, 2020
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ATAC-seq
tissue
kidney
64
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 4 more…
in vitro differentiated cells
neural progenitor cell
10
adipocyte
5
osteoblast
1
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
primary cell
osteoblast
1
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