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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 474total RNA-seq
  • 153ChIP-seq
  • 25ATAC-seq
  • 9DNase-seq
  • 6WGBS
  • 5pCHi-C
  • 4single cell RNA-seq
  • 3small RNA-seq
  • 2Capture-C
  • 1Hi-C
  • 1RNA microarray
  • 1RRBS
Assay category
  • 25DNA accessibility
Date released
  • 10February, 2023
  • 5February, 2021
  • 3October, 2019
  • 2August, 2021
  • 1August, 2017
  • 1January, 2018
  • 1November, 2019
  • 1November, 2020
  • 1October, 2017
Available data
  • 9bigWig
  • 8bed narrowPeak
  • 6bed bed3
  • 5bam
  • 4bed bed3+
  • 4bed bedgraph
  • 4bigBed narrowPeak
  • 2fastq
Organism
  • 25Homo sapiens
Biosample type
  • 17in vitro differentiated cells
  • 6tissue
  • 2primary cell
Organ
  • 152pancreas
  • 103epithelium
  • 75kidney
  • 47heart
  • 46blood vessel
  • 46vasculature
  • 45artery
  • 28eye
  • 25connective tissue
  • 23liver
  • 12bone element
  • 12skeleton
  • 8limb
  • 6adipose tissue
  • 4brain
  • 1blood
  • 1bodily fluid
  • 1musculature of body
  • 1nerve
  • 1pituitary gland
  • 1skin of body
  • 1spleen
Project
  • 25AMP
Genome assembly (visualization)
  • 25hg19
  • 5GRCh38
Lab
  • 23AMP-T2D consortium
  • 2Struan F.A. Grant, CHOP
Audit category:
  • 3inconsistent ontology term
BIOSAMPLE
ASSAY

25 results

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Clear Filters
ATAC-seq
in vitro differentiated cells
adipocyte8
chondrocyte5
immature adipocyte2
osteoblast1
preadipocyte1
tissue
adipose tissue3
adipose tissue(adipose white tissue)1
omental fat pad1
subcutaneous adipose tissue1
primary cell
osteoblast2
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