Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 552ChIP-seq
  • 189total RNA-seq
  • 23ATAC-seq
  • 6DNase-seq
  • 5WGBS
  • 4Hi-C
  • 3pCHi-C
  • 3small RNA-seq
  • 2RRBS
  • 2STARR-seq
  • 1single cell RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 23DNA accessibility
Date released
  • 20May, 2022
  • 1August, 2017
  • 1February, 2021
  • 1October, 2019
Available data
  • 23bed narrowPeak
  • 21bigWig
  • 3bam
  • 1bed bed3
  • 1bigBed narrowPeak
  • 1fastq
Organism
  • 23Homo sapiens
Biosample type
  • 21tissue
  • 1cell line
  • 1primary cell
Organ
  • 152pancreas
  • 103epithelium
  • 75kidney
  • 47heart
  • 46blood vessel
  • 46vasculature
  • 45artery
  • 28eye
  • 25connective tissue
  • 23liver
  • 12bone element
  • 12skeleton
  • 8limb
  • 6adipose tissue
  • 4brain
  • 1blood
  • 1bodily fluid
  • 1musculature of body
  • 1nerve
  • 1pituitary gland
  • 1skin of body
  • 1spleen
Project
  • 23AMP
Genome assembly (visualization)
  • 23hg19
  • 3GRCh38
Lab
  • 20Karen Mohlke, UNC
  • 3AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
  • 1inconsistent replicate
BIOSAMPLE
ASSAY

23 results

search-icontable-tab-icon
Clear Filters
ATAC-seq
tissue
liver20
right lobe of liver1
cell line
HepG21
primary cell
Liver fetal (hepatocyte)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego