Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
574
ChIP-seq
90
ATAC-seq
51
total RNA-seq
22
DNase-seq
21
pCHi-C
19
RRBS
10
Hi-C
8
WGBS
7
snATAC-seq
6
MeRIP-seq
6
single cell RNA-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
1
FAIRE-seq
Assay category
90
DNA accessibility
Date released
55
May, 2020
23
November, 2019
5
February, 2021
3
February, 2023
2
March, 2020
2
October, 2019
Available data
28
bed narrowPeak
26
bam
7
bed bedgraph
5
bigWig
3
txt
1
bed bed3
1
tsv
Organism
90
Homo sapiens
Biosample type
55
primary cell
19
tissue
13
in vitro differentiated cells
3
cell line
Organ
21
pancreas
4
connective tissue
2
epithelium
1
liver
Project
90
AMP
Genome assembly (visualization)
35
hg19
26
GRCh38
Lab
87
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
9
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
90 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
tissue
islet of Langerhans
19
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
+ See 2 more…
cell line
EndoC_BH1
2
HepG2
1
See all biosamples
Download