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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1718
ChIP-seq
total RNA-seq
500
ATAC-seq
365
single cell RNA-seq
203
DNase-seq
86
RNA microarray
84
snATAC-seq
69
WGBS
52
pCHi-C
33
Hi-C
20
RRBS
15
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
Transcription
Date released
2
August, 2021
1
March, 2023
Organism
2
Homo sapiens
Biosample type
2
cell line
1
stem cell
Organ
connective tissue
2
epithelium
2
pancreas
Project
2
AMP
1
community
Lab
2
AMP-T2D consortium
1
Anna Gloyn, Oxford
Audit category:
2
inconsistent ontology term
assay_title!
total RNA-seq
files.file_type!
bed bed3
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
3 results
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Capture-C
CRISPR RNA-seq
cell line
EndoC_BH1
2
stem cell
SB Ad3.1
1